Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein trkh | SAMN05444358_1011140 | Not Available | Negative | 1117158 - 1118606 | 52244.7 |
| hypothetical protein | SAMN05444358_1011141 | Not Available | Negative | 1118658 - 1119347 | 22945.3 |
| gtp cyclohydrolase i | SAMN05444358_1011142 | Not Available | Negative | 1119629 - 1120732 | 41198.7 |
| o-succinylhomoserine sulfhydrylase | SAMN05444358_1011143 | Not Available | Negative | 1120916 - 1122106 | 42119.2 |
| gst-like protein | SAMN05444358_1011145 | Not Available | Positive | 1122377 - 1123066 | 26147.3 |
| creatinine amidohydrolase/fe(ii)-dependent formamide hydrolase involved in riboflavin and f420 biosynthesis | SAMN05444358_1011146 | Not Available | Positive | 1123128 - 1123961 | 29947.8 |
| ferredoxin, 2fe-2s | SAMN05444358_1011147 | Not Available | Positive | 1124117 - 1124440 | 11763.9 |
| repeat domain-containing protein | SAMN05444358_1011148 | Not Available | Positive | 1124521 - 1125225 | 25692.5 |
| phosphoribosylamine--glycine ligase | SAMN05444358_1011149 | Not Available | Negative | 1125332 - 1126594 | 44218.5 |
| exodeoxyribonuclease vii large subunit | SAMN05444358_1011150 | Not Available | Positive | 1126669 - 1128153 | 54675.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
