Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444358_1011100 | Not Available | Positive | 1077983 - 1078978 | 36394.8 |
| Trna-leu | Not Available | Not Available | Positive | 1079006 - 1079092 | Not Available |
| predicted dithiol-disulfide isomerase, dsba family | SAMN05444358_1011102 | Not Available | Positive | 1079223 - 1079882 | 24199.7 |
| lipoyl(octanoyl) transferase | SAMN05444358_1011103 | Not Available | Positive | 1079922 - 1080611 | 25310.0 |
| cobalt-zinc-cadmium efflux system protein | SAMN05444358_1011104 | Not Available | Negative | 1080895 - 1081836 | 34006.2 |
| dna-binding transcriptional regulator, merr family | SAMN05444358_1011105 | Not Available | Positive | 1081918 - 1082331 | 15503.4 |
| histidine triad (hit) family protein | SAMN05444358_1011106 | Not Available | Negative | 1082328 - 1082753 | 15441.6 |
| hypothetical protein | SAMN05444358_1011107 | Not Available | Negative | 1082826 - 1083368 | 19648.4 |
| hypothetical protein | SAMN05444358_1011108 | Not Available | Negative | 1083361 - 1083948 | 21043.7 |
| cytochrome c oxidase subunit 1 | SAMN05444358_1011109 | Not Available | Positive | 1084227 - 1085885 | 61879.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
