Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_1011090 | Not Available | Negative | 1066835 - 1068790 | 74466.0 |
| n-acetylglucosamine 6-phosphate deacetylase | SAMN05444358_1011091 | Not Available | Negative | 1068990 - 1070126 | 39097.0 |
| glutamine--fructose-6-phosphate transaminase | SAMN05444358_1011092 | Not Available | Negative | 1070123 - 1071151 | 35893.7 |
| transcriptional regulator, gntr family | SAMN05444358_1011093 | Not Available | Negative | 1071164 - 1071919 | 27850.3 |
| glucosamine kinase | SAMN05444358_1011094 | Not Available | Negative | 1071906 - 1072793 | 30527.7 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN05444358_1011095 | Not Available | Positive | 1072953 - 1073876 | 31782.2 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444358_1011096 | Not Available | Positive | 1073873 - 1075123 | 45201.4 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444358_1011097 | Not Available | Positive | 1075191 - 1076105 | 34154.7 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444358_1011098 | Not Available | Positive | 1076116 - 1076955 | 30838.8 |
| predicted dehydrogenase | SAMN05444358_1011099 | Not Available | Positive | 1076952 - 1077986 | 37329.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
