Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN05444358_1011080 | Not Available | Negative | 1058275 - 1058883 | 21765.8 |
| scp-2 sterol transfer family protein | SAMN05444358_1011081 | Not Available | Positive | 1058914 - 1059204 | 9684.33 |
| lysophospholipase | SAMN05444358_1011082 | Not Available | Positive | 1059204 - 1060181 | 36114.1 |
| oligoendopeptidase f | SAMN05444358_1011083 | Not Available | Positive | 1060255 - 1062075 | 68148.5 |
| threonine/homoserine efflux transporter rhta | SAMN05444358_1011084 | Not Available | Negative | 1062104 - 1063000 | 32360.0 |
| transcriptional regulator, trar/dksa family | SAMN05444358_1011085 | Not Available | Negative | 1063022 - 1063291 | 9869.76 |
| predicted dehydrogenase | SAMN05444358_1011086 | Not Available | Negative | 1063348 - 1064322 | 35974.0 |
| rna polymerase, sigma 32 subunit, rpoh | SAMN05444358_1011087 | Not Available | Negative | 1064453 - 1065349 | 34036.7 |
| ribosomal large subunit pseudouridine synthase d | SAMN05444358_1011088 | Not Available | Negative | 1065497 - 1066531 | 37071.9 |
| hypothetical protein | SAMN05444358_1011089 | Not Available | Positive | 1066593 - 1066832 | 8669.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
