Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-carbamoyl-l-amino-acid hydrolase | SAMN05444358_1011060 | Not Available | Negative | 1035600 - 1036850 | 45187.4 |
| transcriptional regulator, tetr family | SAMN05444358_1011061 | Not Available | Positive | 1037022 - 1037630 | 22963.7 |
| dihydroorotate oxidase b, catalytic subunit /dihydrouracil dehydrogenase (nad+) /dihydropyrimidine dehydrogenase (nadp+) | SAMN05444358_1011062 | Not Available | Negative | 1037941 - 1039245 | 46827.7 |
| glutamate synthase (nadph/nadh) small chain | SAMN05444358_1011063 | Not Available | Negative | 1039316 - 1040650 | 46063.7 |
| anti-ecfsigma factor, chrr | SAMN05444358_1011064 | Not Available | Negative | 1040811 - 1041443 | 22897.5 |
| hypothetical protein | SAMN05444358_1011065 | Not Available | Positive | 1041596 - 1042591 | 37518.2 |
| o-acetylhomoserine sulfhydrylase | SAMN05444358_1011066 | Not Available | Positive | 1042664 - 1043956 | 45946.3 |
| protein n-acetyltransferase, rimj/riml family | SAMN05444358_1011067 | Not Available | Positive | 1043961 - 1044671 | 26743.5 |
| hypothetical protein | SAMN05444358_1011068 | Not Available | Negative | 1044673 - 1045368 | 23837.4 |
| hypothetical protein | SAMN05444358_1011069 | Not Available | Positive | 1045533 - 1047434 | 67780.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
