Rubrivivax gelatinosus IL144

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Rubrivivax

Description

Rubrivivax gelatinosus IL144 is an anaerobic bacterium that thrives in low-oxygen environments. This species is notable for its single replicon, which is essential for its genetic stability and replication processes. The genome of Rubrivivax gelatinosus IL144 is accessible through the accession number NC_017075.1, allowing researchers to study its genetic makeup and functional attributes. As an anaerobe, Rubrivivax gelatinosus IL144 plays a significant role in various ecological niches, particularly in environments where oxygen is limited, such as sediments and aquatic systems. Its ability to survive and reproduce without oxygen suggests that it may contribute to the degradation of organic matter in these ecosystems, potentially influencing nutrient cycling and energy flow. The metabolic pathways of anaerobic bacteria like Rubrivivax gelatinosus IL144 are often adapted to utilize alternative electron acceptors, which can have implications for biogeochemical processes. Understanding the characteristics of this bacterium may provide insights into its ecological functions, including its role in bioremediation and its interactions within microbial communities in anaerobic environments. Overall, Rubrivivax gelatinosus IL144 exemplifies the diversity and adaptability of microbial life in oxygen-depleted habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRubrivivax
SpeciesRubrivivax gelatinosus
StrainIL144

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrivivax gelatinosus IL144, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaRGE_RS00015A2SBM4Positive1 - 144653036.9
dna polymerase iii subunit betaRGE_RS00020P0A120Positive1674 - 278340723.5
dna topoisomerase (atp-hydrolyzing) subunit bRGE_RS00025P22118Positive2916 - 540591685.5
uracil-dna glycosylaseRGE_RS00030Not AvailableNegative5594 - 626224872.8
nucleoside triphosphate pyrophosphohydrolase family proteinRGE_RS23505Not AvailableNegative6259 - 740442629.3
hypothetical proteinRGE_RS23510Not AvailableNegative7397 - 802023481.6
tir domain-containing proteinRGE_RS23515Not AvailableNegative8029 - 849917358.2
hypothetical proteinRGE_RS00040Not AvailableNegative8554 - 936329333.3
toll/interleukin-1 receptor domain-containing proteinRGE_RS00045Not AvailableNegative9360 - 1051743048.7
helix-turn-helix domain-containing proteinRGE_RS00050Not AvailablePositive10835 - 111049524.44

Displaying genes 1 – 10 of 4694 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.