Rubrivivax gelatinosus IL144

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Rubrivivax

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRubrivivax
SpeciesRubrivivax gelatinosus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrivivax gelatinosus IL144

Accession NumberNC_017075.1

Gene Summary

Adenine Count

725927 bp

Thymine Count

724354 bp

Guanine Count

1798204 bp

Cytosine Count

1794768 bp

Genome Length

5043253 bp

Protein-coding Genes

4438063 genes

Non-Coding Genes

605190 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cryptochrome/photolyase family proteinRGE_RS00100A9CH39+23545 - 2508657379.3
glycerate kinaseRGE_RS00105Q44472-25087 - 2639144078.0
pitrilysin family proteinRGE_RS00110Q1RJ61+26468 - 2775746249.0
rna 2',3'-cyclic phosphodiesteraseRGE_RS00115Not Available-27765 - 2827418541.4
proq/fino family proteinRGE_RS00120Not Available-28289 - 2910729628.8
m1 family metallopeptidaseRGE_RS00125Q6Z6L4+29240 - 3190395520.1
diguanylate cyclaseRGE_RS00130Q8X8Q3-31904 - 3339453534.0
alpha/beta hydrolaseRGE_RS00135Not Available+33748 - 3459329149.9
coxg family proteinRGE_RS00140Not Available-34975 - 3560721616.9
hypothetical proteinRGE_RS00145Not Available+35825 - 3615111817.5

Displaying genes 21 – 30 of 4694 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

298 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 298 metabolites