Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosome-binding factor rbfa | LACAL_RS04895 | Not Available | Positive | 1129041 - 1129442 | 15221.5 |
| abc transporter permease | LACAL_RS04900 | Not Available | Positive | 1129446 - 1130660 | 44478.7 |
| trna dihydrouridine synthase dusb | LACAL_RS04905 | Not Available | Negative | 1130668 - 1131663 | 37638.5 |
| psbp-related protein | LACAL_RS04910 | Not Available | Positive | 1131732 - 1132253 | 20569.0 |
| prolipoprotein diacylglyceryl transferase family protein | LACAL_RS04915 | Not Available | Positive | 1132258 - 1133001 | 28155.2 |
| radical sam protein | LACAL_RS04920 | Not Available | Positive | 1132991 - 1134382 | 53704.3 |
| hypothetical protein | LACAL_RS04925 | Not Available | Positive | 1134448 - 1134654 | 7399.75 |
| tonb-dependent receptor domain-containing protein | LACAL_RS04930 | Not Available | Negative | 1134677 - 1137091 | 90913.6 |
| translation elongation factor 4 | LACAL_RS04935 | Not Available | Positive | 1137229 - 1139025 | 66669.5 |
| cation:proton antiporter | LACAL_RS04940 | Not Available | Negative | 1139100 - 1140950 | 67409.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
