Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | LACAL_RS04845 | Not Available | Negative | 1122199 - 1123551 | 50064.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | LACAL_RS04850 | Not Available | Negative | 1123629 - 1124111 | 17323.9 |
| beta-ketoacyl-acp synthase iii | LACAL_RS04855 | Not Available | Negative | 1124144 - 1125142 | 36413.2 |
| 50s ribosomal protein l32 | LACAL_RS04860 | Not Available | Negative | 1125322 - 1125525 | 7816.34 |
| yced family protein | LACAL_RS04865 | Not Available | Negative | 1125535 - 1126074 | 21086.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | LACAL_RS04870 | Not Available | Negative | 1126160 - 1127221 | 39249.1 |
| riboflavin synthase | LACAL_RS04875 | Not Available | Positive | 1127288 - 1127878 | 21752.9 |
| hypothetical protein | LACAL_RS04880 | Not Available | Negative | 1127875 - 1128084 | 7434.37 |
| Trna-met | Not Available | Not Available | Positive | 1128354 - 1128430 | Not Available |
| methylmalonyl-coa epimerase | LACAL_RS04890 | Not Available | Negative | 1128478 - 1128894 | 15439.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
