Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylglycinamide formyltransferase | LACAL_RS04795 | Not Available | Negative | 1111597 - 1112166 | 21202.7 |
| acyl carrier protein | LACAL_RS04800 | Not Available | Positive | 1112349 - 1112582 | 8377.73 |
| beta-ketoacyl-acp synthase ii | LACAL_RS04805 | Not Available | Positive | 1112595 - 1113845 | 44269.8 |
| ribonuclease iii | LACAL_RS04810 | Not Available | Positive | 1113854 - 1114597 | 28479.4 |
| ipexxxvdy family protein | LACAL_RS04815 | Not Available | Positive | 1114733 - 1115221 | 18931.4 |
| pyruvate kinase | LACAL_RS04820 | Not Available | Positive | 1115221 - 1116648 | 52854.5 |
| dna polymerase iv | LACAL_RS04825 | Not Available | Negative | 1116791 - 1117891 | 41107.7 |
| cyth domain-containing protein | LACAL_RS04830 | Not Available | Positive | 1117986 - 1118453 | 18041.3 |
| ycii family protein | LACAL_RS04835 | Not Available | Positive | 1118465 - 1118977 | 19224.2 |
| reprolysin-like metallopeptidase | LACAL_RS04840 | Not Available | Negative | 1119031 - 1122009 | 106448.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
