Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | LACAL_RS04645 | Not Available | Negative | 1075985 - 1076974 | 36337.7 |
| large conductance mechanosensitive channel protein mscl | LACAL_RS04650 | Not Available | Negative | 1077160 - 1077561 | 14114.7 |
| alanine racemase | LACAL_RS04655 | Not Available | Negative | 1077658 - 1078764 | 41201.8 |
| thymidine kinase | LACAL_RS04660 | Not Available | Negative | 1078757 - 1079404 | 24228.9 |
| hypothetical protein | LACAL_RS04665 | Not Available | Positive | 1079525 - 1080259 | 28187.2 |
| doxx family protein | LACAL_RS04670 | Not Available | Positive | 1080265 - 1080624 | 13984.5 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | LACAL_RS04675 | Not Available | Positive | 1080675 - 1081349 | 25005.4 |
| dihydrolipoyl dehydrogenase family protein | LACAL_RS04680 | Not Available | Positive | 1081427 - 1082788 | 50346.3 |
| uracil-dna glycosylase family protein | LACAL_RS04685 | Not Available | Positive | 1082791 - 1083363 | 21814.7 |
| carboxymuconolactone decarboxylase family protein | LACAL_RS04690 | Not Available | Negative | 1083959 - 1084549 | 21987.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
