Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | LACAL_RS04595 | Not Available | Positive | 1058772 - 1059635 | 33004.7 |
| antibiotic biosynthesis monooxygenase family protein | LACAL_RS04600 | Not Available | Positive | 1059670 - 1059987 | 12516.8 |
| penicillin-binding protein 1c | LACAL_RS04605 | Not Available | Positive | 1059990 - 1062341 | 88966.5 |
| choice-of-anchor l domain-containing protein | LACAL_RS15540 | Not Available | Positive | 1062501 - 1068179 | 201911.0 |
| type ix secretion system membrane protein porp/sprf | LACAL_RS04615 | Not Available | Positive | 1068204 - 1069109 | 32923.0 |
| ompa family protein | LACAL_RS04620 | Not Available | Positive | 1069186 - 1071045 | 68802.7 |
| nad(p)/fad-dependent oxidoreductase | LACAL_RS04625 | Not Available | Positive | 1071182 - 1072294 | 41736.9 |
| hypothetical protein | LACAL_RS04630 | Not Available | Positive | 1072295 - 1072744 | 16718.1 |
| abc transporter atp-binding protein | LACAL_RS04635 | Not Available | Negative | 1072750 - 1073658 | 34387.6 |
| prolyl oligopeptidase family serine peptidase | LACAL_RS04640 | Not Available | Negative | 1073726 - 1075891 | 81169.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
