Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--fructose-6-phosphate transaminase (isomerizing) | LACAL_RS04200 | Not Available | Positive | 957222 - 959069 | 67953.4 |
| tonb-dependent receptor | LACAL_RS04205 | Not Available | Positive | 959228 - 961966 | 99984.1 |
| sgnh/gdsl hydrolase family protein | LACAL_RS04210 | Not Available | Positive | 961977 - 963599 | 56189.9 |
| f0f1 atp synthase subunit beta | LACAL_RS04215 | Not Available | Positive | 963767 - 965275 | 53899.5 |
| f0f1 atp synthase subunit epsilon | LACAL_RS04220 | Not Available | Positive | 965350 - 965628 | 9992.06 |
| hypothetical protein | LACAL_RS04225 | Not Available | Positive | 965730 - 966404 | 26571.2 |
| lexa family protein | LACAL_RS04230 | Not Available | Negative | 966462 - 966905 | 16557.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | LACAL_RS04235 | Not Available | Positive | 966995 - 968122 | 42321.1 |
| duf2007 domain-containing protein | LACAL_RS04240 | Not Available | Positive | 968160 - 968573 | 15473.7 |
| dethiobiotin synthase | LACAL_RS04245 | Not Available | Positive | 968599 - 969222 | 23053.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
