Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | LACAL_RS04105 | Not Available | Negative | 935546 - 937789 | 83585.3 |
| excinuclease abc subunit uvrc | LACAL_RS04110 | Not Available | Negative | 937790 - 939592 | 69452.4 |
| atp-dependent zinc protease | LACAL_RS04115 | Not Available | Positive | 939712 - 940137 | 16301.5 |
| 30s ribosomal protein s6--l-glutamate ligase | LACAL_RS04120 | Not Available | Positive | 940134 - 941009 | 31753.8 |
| succinylglutamate desuccinylase/aspartoacylase family protein | LACAL_RS04125 | Not Available | Positive | 941010 - 941984 | 35880.4 |
| 5-formyltetrahydrofolate cyclo-ligase | LACAL_RS04130 | Not Available | Positive | 941992 - 942573 | 22352.9 |
| hypothetical protein | LACAL_RS15530 | Not Available | Positive | 942647 - 943297 | 25530.0 |
| sensor histidine kinase | LACAL_RS15535 | Not Available | Positive | 943463 - 944092 | 23621.2 |
| response regulator | LACAL_RS04140 | Not Available | Positive | 944118 - 944531 | 15638.0 |
| lipoprotein signal peptidase | LACAL_RS04145 | Not Available | Negative | 944536 - 945171 | 23940.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
