Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | LACAL_RS04055 | Not Available | Positive | 921971 - 923056 | 41398.6 |
| hypothetical protein | LACAL_RS04060 | Not Available | Negative | 923122 - 923553 | 16305.6 |
| choice-of-anchor j domain-containing protein | LACAL_RS04065 | Not Available | Negative | 923660 - 925348 | 61816.4 |
| tonb-dependent receptor | LACAL_RS04070 | Not Available | Negative | 925360 - 927900 | 92274.4 |
| glucose-6-phosphate isomerase | LACAL_RS04075 | Not Available | Negative | 928052 - 929695 | 61906.0 |
| m23 family metallopeptidase | LACAL_RS04080 | Not Available | Negative | 929695 - 931023 | 50822.9 |
| tryptophan 2,3-dioxygenase family protein | LACAL_RS04085 | Not Available | Negative | 930981 - 931904 | 36554.2 |
| duf3108 domain-containing protein | LACAL_RS04090 | Not Available | Negative | 931904 - 932686 | 30202.6 |
| 4-hydroxyphenylpyruvate dioxygenase | LACAL_RS04095 | Not Available | Negative | 932833 - 933996 | 43923.9 |
| homogentisate 1,2-dioxygenase | LACAL_RS04100 | Not Available | Negative | 934172 - 935332 | 45081.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
