Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LACAL_RS03705 | Not Available | Positive | 836993 - 837556 | 21999.3 |
| tetratricopeptide repeat protein | LACAL_RS03710 | Not Available | Positive | 837528 - 838364 | 32388.6 |
| chloride channel protein | LACAL_RS03715 | Not Available | Positive | 838403 - 840181 | 65217.2 |
| hypothetical protein | LACAL_RS03720 | Not Available | Positive | 840220 - 840456 | 9475.7 |
| nucleoside deaminase | LACAL_RS03725 | Not Available | Negative | 840453 - 840902 | 16683.3 |
| t9ss-dependent m36 family metallopeptidase | LACAL_RS03730 | Not Available | Negative | 840968 - 843619 | 95448.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | LACAL_RS03735 | Not Available | Positive | 843759 - 845537 | 65324.2 |
| deoxyguanosinetriphosphate triphosphohydrolase | LACAL_RS03740 | Not Available | Negative | 845527 - 846867 | 50618.4 |
| hypothetical protein | LACAL_RS03745 | Not Available | Positive | 847071 - 848351 | 43966.7 |
| tonb-dependent receptor | LACAL_RS03750 | Not Available | Positive | 848436 - 851291 | 105566.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
