Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | LACAL_RS03605 | Not Available | Negative | 808363 - 808944 | 22097.7 |
| hypothetical protein | LACAL_RS03610 | Not Available | Positive | 809096 - 809533 | 16507.8 |
| hypothetical protein | LACAL_RS03615 | Not Available | Positive | 809575 - 810558 | 36060.9 |
| hypothetical protein | LACAL_RS03620 | Not Available | Positive | 810855 - 812813 | 75562.0 |
| chat domain-containing protein | LACAL_RS03625 | Not Available | Positive | 812837 - 815440 | 99246.6 |
| retropepsin-like aspartic protease | LACAL_RS03630 | Not Available | Positive | 815397 - 815843 | 16412.4 |
| response regulator transcription factor | LACAL_RS03635 | Not Available | Positive | 815894 - 816532 | 24356.5 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | LACAL_RS03640 | Not Available | Negative | 817337 - 818590 | 44816.6 |
| duf3887 domain-containing protein | LACAL_RS03645 | Not Available | Negative | 818639 - 819013 | 14130.0 |
| 2-oxoglutarate dehydrogenase e1 component | LACAL_RS03650 | Not Available | Negative | 819034 - 821790 | 104892.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
