Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase factor sigma-54 | LACAL_RS03555 | Not Available | Positive | 800216 - 801670 | 55719.8 |
| membrane protein | LACAL_RS03560 | Not Available | Positive | 801670 - 802299 | 23603.4 |
| porin family protein | LACAL_RS03565 | Not Available | Negative | 802294 - 802995 | 26904.0 |
| exbd/tolr family protein | LACAL_RS03570 | Not Available | Negative | 803108 - 803587 | 17932.8 |
| exbd/tolr family protein | LACAL_RS03575 | Not Available | Negative | 803601 - 804233 | 23673.5 |
| hypothetical protein | LACAL_RS03580 | Not Available | Negative | 804236 - 804676 | 15312.6 |
| mota/tolq/exbb proton channel family protein | LACAL_RS03585 | Not Available | Negative | 804706 - 805479 | 27417.8 |
| asparaginase | LACAL_RS03590 | Not Available | Negative | 805721 - 806752 | 38504.7 |
| tatd family hydrolase | LACAL_RS03595 | Not Available | Negative | 806783 - 807550 | 29577.6 |
| tetratricopeptide repeat protein | LACAL_RS03600 | Not Available | Negative | 807614 - 808357 | 28388.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
