Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | LACAL_RS03505 | Not Available | Positive | 789620 - 790075 | 16731.2 |
| 30s ribosomal protein s9 | LACAL_RS03510 | Not Available | Positive | 790075 - 790461 | 14542.8 |
| 30s ribosomal protein s2 | LACAL_RS03515 | Not Available | Positive | 790637 - 791410 | 28580.0 |
| translation elongation factor ts | LACAL_RS03520 | Not Available | Positive | 791498 - 792457 | 34700.3 |
| ump kinase | LACAL_RS03525 | Not Available | Positive | 792634 - 793341 | 25670.2 |
| ribosome recycling factor | LACAL_RS03530 | Not Available | Positive | 793504 - 794061 | 20406.4 |
| peroxiredoxin family protein | LACAL_RS14960 | Not Available | Positive | 794132 - 794872 | 28281.0 |
| duf5686 family protein | LACAL_RS03540 | Not Available | Positive | 794876 - 796144 | 49034.2 |
| efflux rnd transporter permease subunit | LACAL_RS03545 | Not Available | Positive | 796209 - 798620 | 91592.0 |
| asparagine--trna ligase | LACAL_RS03550 | Not Available | Positive | 798663 - 800093 | 54542.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
