Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | LACAL_RS00310 | Not Available | Positive | 56941 - 57861 | 35657.9 |
| phytoene desaturase family protein | LACAL_RS00315 | Not Available | Positive | 57865 - 59346 | 56142.9 |
| phytoene/squalene synthase family protein | LACAL_RS00320 | Not Available | Positive | 59330 - 60169 | 32339.1 |
| sterol desaturase family protein | LACAL_RS00325 | Not Available | Positive | 60169 - 60618 | 18355.6 |
| lycopene cyclase family protein | LACAL_RS00330 | Not Available | Positive | 60629 - 61780 | 45145.2 |
| tlpa family protein disulfide reductase | LACAL_RS00335 | Not Available | Negative | 61769 - 62332 | 21541.3 |
| anti-sigma factor | LACAL_RS00340 | Not Available | Negative | 62454 - 63323 | 30441.6 |
| crp/fnr family transcriptional regulator | LACAL_RS00345 | Not Available | Negative | 63403 - 64074 | 26290.9 |
| c1q-like domain-containing protein | LACAL_RS14905 | Not Available | Positive | 64290 - 64952 | 23716.3 |
| aconitate hydratase | LACAL_RS00355 | Not Available | Negative | 65029 - 67296 | 81940.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
