Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatinase | LACAL_RS03310 | Not Available | Negative | 725485 - 726423 | 35236.2 |
| arginine decarboxylase | LACAL_RS03315 | Not Available | Negative | 726413 - 727810 | 53898.0 |
| asch domain-containing protein | LACAL_RS03320 | Not Available | Positive | 728236 - 728790 | 21166.3 |
| pseudouridine synthase | LACAL_RS03325 | Not Available | Negative | 728809 - 729666 | 31849.5 |
| carbon-nitrogen hydrolase family protein | LACAL_RS03330 | Not Available | Negative | 729786 - 730736 | 35654.8 |
| geranylgeranylglycerol-phosphate geranylgeranyltransferase | LACAL_RS03335 | Not Available | Negative | 730738 - 731643 | 34852.2 |
| mevalonate kinase | LACAL_RS03340 | Not Available | Negative | 731719 - 732648 | 34472.5 |
| diphosphomevalonate/mevalonate 3,5-bisphosphate decarboxylase family protein | LACAL_RS03345 | Not Available | Negative | 732691 - 733773 | 40840.1 |
| tetr/acrr family transcriptional regulator | LACAL_RS14955 | Not Available | Positive | 733999 - 734556 | 21483.7 |
| nad(p)/fad-dependent oxidoreductase | LACAL_RS03355 | Not Available | Negative | 734560 - 735771 | 44930.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
