Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system ywqk family antitoxin | LACAL_RS03260 | Not Available | Positive | 717416 - 717892 | 18989.6 |
| glycosyltransferase family 2 protein | LACAL_RS03265 | Not Available | Positive | 717889 - 718581 | 25945.6 |
| cellulose synthase family protein | LACAL_RS03270 | Not Available | Positive | 718638 - 720071 | 55080.1 |
| glycosyltransferase 87 family protein | LACAL_RS03275 | Not Available | Positive | 720182 - 721549 | 52987.1 |
| class i sam-dependent methyltransferase | LACAL_RS03280 | Not Available | Negative | 721552 - 722223 | 25340.9 |
| duf2383 domain-containing protein | LACAL_RS03285 | Not Available | Negative | 722346 - 722825 | 18241.6 |
| hypothetical protein | LACAL_RS03290 | Not Available | Negative | 723011 - 723361 | 13099.5 |
| rmd1 family protein | LACAL_RS03295 | Not Available | Negative | 723422 - 724201 | 30733.5 |
| hypothetical protein | LACAL_RS03300 | Not Available | Negative | 724201 - 724518 | 12370.3 |
| deoxyhypusine synthase family protein | LACAL_RS03305 | Not Available | Negative | 724521 - 725495 | 36605.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
