Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | LACAL_RS03010 | Not Available | Negative | 650840 - 652132 | 46156.5 |
| hypothetical protein | LACAL_RS03015 | Not Available | Negative | 652479 - 654029 | 60673.9 |
| 2-isopropylmalate synthase | LACAL_RS03020 | Not Available | Positive | 654174 - 655349 | 42616.8 |
| 3-isopropylmalate dehydratase large subunit | LACAL_RS03025 | Not Available | Positive | 655350 - 656732 | 50675.8 |
| 3-isopropylmalate dehydratase small subunit | LACAL_RS03030 | Not Available | Positive | 656734 - 657321 | 21779.8 |
| 3-isopropylmalate dehydrogenase | LACAL_RS03035 | Not Available | Positive | 657491 - 658609 | 40470.4 |
| phosphoenolpyruvate carboxylase | LACAL_RS03040 | Not Available | Positive | 658613 - 661192 | 98297.8 |
| p-ii family nitrogen regulator | LACAL_RS03045 | Not Available | Negative | 661308 - 661649 | 12654.2 |
| ammonium transporter | LACAL_RS03050 | Not Available | Negative | 661732 - 663036 | 45467.4 |
| outer membrane beta-barrel protein | LACAL_RS03055 | Not Available | Negative | 663078 - 664064 | 35868.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
