Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna guanosine(34) transglycosylase tgt | LACAL_RS00260 | Not Available | Negative | 49998 - 51128 | 42926.6 |
| transketolase | LACAL_RS00265 | Not Available | Positive | 51319 - 52164 | 30511.2 |
| transketolase family protein | LACAL_RS00270 | Not Available | Positive | 52186 - 53139 | 34231.1 |
| outer membrane beta-barrel protein | LACAL_RS00275 | Not Available | Positive | 53268 - 53864 | 21673.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | LACAL_RS14900 | Not Available | Negative | 53920 - 55032 | 40634.4 |
| rna-binding s4 domain-containing protein | LACAL_RS00285 | Not Available | Positive | 55112 - 55486 | 14670.7 |
| phosphoribosyltransferase family protein | LACAL_RS00290 | Not Available | Positive | 55505 - 56008 | 18979.2 |
| shikimate kinase | LACAL_RS00295 | Not Available | Negative | 56000 - 56518 | 19736.8 |
| Trna-lys | Not Available | Not Available | Positive | 56644 - 56716 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 56766 - 56850 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
