Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxy terminal-processing peptidase | LACAL_RS02860 | Not Available | Negative | 617018 - 619159 | 82581.1 |
| 5'/3'-nucleotidase sure | LACAL_RS02865 | Not Available | Positive | 619327 - 620103 | 28495.8 |
| hypothetical protein | LACAL_RS02870 | Not Available | Positive | 620096 - 620383 | 10532.7 |
| lipid-a-disaccharide synthase | LACAL_RS02875 | Not Available | Positive | 620429 - 621550 | 42980.7 |
| c40 family peptidase | LACAL_RS02880 | Not Available | Positive | 621551 - 622108 | 20751.3 |
| comec/rec2 family competence protein | LACAL_RS02885 | Not Available | Positive | 622134 - 624152 | 76689.5 |
| thioredoxin family protein | LACAL_RS02890 | Not Available | Negative | 624158 - 624709 | 21437.9 |
| peptide mfs transporter | LACAL_RS02895 | Not Available | Negative | 624818 - 626392 | 57339.0 |
| peptide mfs transporter | LACAL_RS02900 | Not Available | Negative | 626428 - 628017 | 58194.3 |
| s9 family peptidase | LACAL_RS02905 | Not Available | Negative | 628074 - 630263 | 83776.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
