Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | LACAL_RS02810 | Not Available | Negative | 606808 - 608040 | 45571.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | LACAL_RS02815 | Not Available | Negative | 608095 - 609558 | 53893.4 |
| penicillin-binding protein | LACAL_RS02820 | Not Available | Negative | 609555 - 611504 | 73457.4 |
| ftsl-like putative cell division protein | LACAL_RS02825 | Not Available | Negative | 611565 - 611888 | 12229.2 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | LACAL_RS02830 | Not Available | Negative | 611889 - 612785 | 34307.3 |
| division/cell wall cluster transcriptional repressor mraz | LACAL_RS02835 | Not Available | Negative | 612772 - 613242 | 17369.1 |
| alpha/beta fold hydrolase | LACAL_RS02840 | Not Available | Positive | 613539 - 614303 | 28577.7 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | LACAL_RS02845 | Not Available | Positive | 614424 - 615044 | 23651.9 |
| rlua family pseudouridine synthase | LACAL_RS02850 | Not Available | Positive | 615050 - 615916 | 32780.8 |
| abc transporter permease | LACAL_RS02855 | Not Available | Negative | 615923 - 617011 | 40029.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
