Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | LACAL_RS02710 | Not Available | Positive | 585731 - 587137 | 53517.1 |
| hypothetical protein | LACAL_RS02715 | Not Available | Positive | 587274 - 588224 | 36875.4 |
| rna polymerase sigma factor | LACAL_RS02720 | Not Available | Positive | 588327 - 588881 | 21388.8 |
| outer membrane beta-barrel protein | LACAL_RS02725 | Not Available | Positive | 588871 - 590040 | 45040.6 |
| pyrroline-5-carboxylate reductase | LACAL_RS02730 | Not Available | Positive | 590353 - 591159 | 29424.4 |
| glutamate 5-kinase | LACAL_RS02735 | Not Available | Positive | 591161 - 591952 | 29198.0 |
| glutamate-5-semialdehyde dehydrogenase | LACAL_RS02740 | Not Available | Positive | 591964 - 593166 | 45046.2 |
| rna polymerase sigma factor rpod/siga | LACAL_RS02745 | Not Available | Positive | 593277 - 594140 | 32810.4 |
| ribulose-phosphate 3-epimerase | LACAL_RS02750 | Not Available | Positive | 594336 - 594998 | 24466.7 |
| transposase | LACAL_RS02755 | Not Available | Negative | 595007 - 595938 | 32159.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
