Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-translocating pyrophosphatase | LACAL_RS02460 | Not Available | Negative | 526074 - 528494 | 84474.8 |
| m1 family metallopeptidase | LACAL_RS02465 | Not Available | Negative | 528650 - 530959 | 88538.2 |
| duf6702 family protein | LACAL_RS02470 | Not Available | Negative | 531030 - 531530 | 19623.0 |
| carboxypeptidase-like regulatory domain-containing protein | LACAL_RS02475 | Not Available | Negative | 531594 - 532370 | 29260.1 |
| carboxypeptidase-like regulatory domain-containing protein | LACAL_RS02480 | Not Available | Negative | 532360 - 533184 | 31246.7 |
| dipeptidase pepe | LACAL_RS02485 | Not Available | Positive | 533301 - 534008 | 26530.7 |
| Trna-gly | Not Available | Not Available | Positive | 534042 - 534114 | Not Available |
| beta strand repeat-containing protein | LACAL_RS02495 | Not Available | Positive | 534285 - 539699 | 187990.0 |
| gliding motility-associated c-terminal domain-containing protein | LACAL_RS02500 | Not Available | Positive | 539709 - 540845 | 42336.4 |
| gnat family n-acetyltransferase | LACAL_RS02505 | Not Available | Negative | 540846 - 541271 | 16680.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
