Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | LACAL_RS00210 | Not Available | Positive | 40030 - 40374 | 13264.4 |
| had family hydrolase | LACAL_RS00215 | Not Available | Positive | 40522 - 41328 | 30723.7 |
| adenylate/guanylate cyclase domain-containing protein | LACAL_RS00220 | Not Available | Negative | 41325 - 42392 | 41275.7 |
| ef-hand domain-containing protein | LACAL_RS00225 | Not Available | Negative | 42396 - 42668 | 10418.3 |
| hypothetical protein | LACAL_RS00230 | Not Available | Negative | 42838 - 44094 | 47837.1 |
| ai-2e family transporter | LACAL_RS00235 | Not Available | Negative | 44197 - 45225 | 39115.9 |
| replicative dna helicase | LACAL_RS00240 | Not Available | Negative | 45324 - 46856 | 56917.9 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | LACAL_RS00245 | Not Available | Negative | 47025 - 47978 | 35766.3 |
| dmt family transporter | LACAL_RS00250 | Not Available | Negative | 48021 - 48935 | 34165.1 |
| lptf/lptg family permease | LACAL_RS00255 | Not Available | Negative | 48922 - 49995 | 41348.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
