Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | LACAL_RS02410 | Not Available | Positive | 513093 - 513776 | 26267.0 |
| sensor histidine kinase | LACAL_RS02415 | Not Available | Positive | 513876 - 515282 | 54208.7 |
| response regulator transcription factor | LACAL_RS02420 | Not Available | Positive | 515251 - 515958 | 27237.2 |
| t9ss-dependent choice-of-anchor j family protein | LACAL_RS02425 | Not Available | Negative | 516010 - 519225 | 116948.0 |
| t9ss type a sorting domain-containing protein | LACAL_RS02430 | Not Available | Positive | 519419 - 521011 | 57884.9 |
| hypothetical protein | LACAL_RS02435 | Not Available | Positive | 521109 - 521888 | 30198.5 |
| deoxynucleoside kinase | LACAL_RS02440 | Not Available | Positive | 521890 - 522504 | 23779.2 |
| polyphosphate kinase 1 | LACAL_RS02445 | Not Available | Positive | 522572 - 524593 | 78168.5 |
| hypothetical protein | LACAL_RS02450 | Not Available | Positive | 524593 - 524991 | 15181.9 |
| app1 family protein | LACAL_RS02455 | Not Available | Negative | 524981 - 525985 | 38271.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
