Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LACAL_RS02260 | Not Available | Negative | 483978 - 484757 | 29153.5 |
| rna polymerase sigma factor | LACAL_RS02265 | Not Available | Negative | 484744 - 485307 | 21755.3 |
| polyprenyl synthetase family protein | LACAL_RS02270 | Not Available | Negative | 485437 - 486414 | 37256.8 |
| t9ss type a sorting domain-containing protein | LACAL_RS02275 | Not Available | Positive | 486598 - 487539 | 34457.9 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | LACAL_RS02280 | Not Available | Negative | 487584 - 488624 | 39411.4 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | LACAL_RS02285 | Not Available | Negative | 488741 - 489790 | 40264.1 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | LACAL_RS02290 | Not Available | Negative | 489915 - 491147 | 45228.9 |
| nucleotide pyrophosphohydrolase | LACAL_RS02295 | Not Available | Negative | 491192 - 491518 | 12596.9 |
| d-aminoacyl-trna deacylase | LACAL_RS02300 | Not Available | Negative | 491520 - 491972 | 16501.0 |
| ribosome small subunit-dependent gtpase a | LACAL_RS02305 | Not Available | Negative | 491999 - 492949 | 35889.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
