Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | LACAL_RS02160 | Not Available | Positive | 464992 - 465726 | 26331.1 |
| rhomboid family intramembrane serine protease | LACAL_RS02165 | Not Available | Negative | 465721 - 466485 | 29604.9 |
| replication-associated recombination protein a | LACAL_RS02170 | Not Available | Positive | 466597 - 467874 | 47516.1 |
| m43 family zinc metalloprotease | LACAL_RS14940 | Not Available | Negative | 467925 - 469901 | 71939.4 |
| hypothetical protein | LACAL_RS14945 | Not Available | Negative | 469954 - 470775 | 32043.6 |
| yjjg family noncanonical pyrimidine nucleotidase | LACAL_RS02185 | Not Available | Negative | 470772 - 471458 | 26808.2 |
| polysaccharide deacetylase family protein | LACAL_RS02190 | Not Available | Negative | 471448 - 472749 | 51281.0 |
| radc family protein | LACAL_RS02195 | Not Available | Negative | 472825 - 473523 | 25361.8 |
| duf1569 domain-containing protein | LACAL_RS02200 | Not Available | Positive | 473638 - 474081 | 17404.1 |
| fmn-binding negative transcriptional regulator | LACAL_RS02205 | Not Available | Positive | 474100 - 474696 | 22723.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
