Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 | LACAL_RS02110 | Not Available | Negative | 449555 - 449929 | 13678.7 |
| potra domain-containing protein | LACAL_RS02115 | Not Available | Positive | 450109 - 451803 | 65328.7 |
| susc/raga family tonb-linked outer membrane protein | LACAL_RS02120 | Not Available | Positive | 451914 - 455024 | 113089.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | LACAL_RS02125 | Not Available | Positive | 455028 - 456551 | 56280.8 |
| hypothetical protein | LACAL_RS02130 | Not Available | Positive | 456567 - 457439 | 30873.7 |
| hypothetical protein | LACAL_RS02135 | Not Available | Positive | 457448 - 458473 | 37535.5 |
| susc/raga family tonb-linked outer membrane protein | LACAL_RS02140 | Not Available | Positive | 458711 - 461719 | 109934.0 |
| ragb/susd family nutrient uptake outer membrane protein | LACAL_RS02145 | Not Available | Positive | 461738 - 463240 | 55196.1 |
| hypothetical protein | LACAL_RS02150 | Not Available | Positive | 463267 - 464085 | 29195.5 |
| hypothetical protein | LACAL_RS02155 | Not Available | Positive | 464097 - 464903 | 28232.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
