Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6095 family protein | LACAL_RS00160 | Not Available | Positive | 30358 - 30600 | 9014.53 |
| hypothetical protein | LACAL_RS00165 | Not Available | Negative | 30605 - 31099 | 18543.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 31222 - 31329 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 31454 - 34272 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 34429 - 34505 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 34589 - 34665 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 34749 - 36268 | Not Available |
| threonine--trna ligase | LACAL_RS00195 | Not Available | Positive | 37140 - 39074 | 73149.0 |
| translation initiation factor if-3 | LACAL_RS00200 | Not Available | Positive | 39146 - 39655 | 19667.2 |
| 50s ribosomal protein l35 | LACAL_RS00205 | Not Available | Positive | 39724 - 39921 | 7483.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
