Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LACAL_RS14935 | Not Available | Negative | 420427 - 422112 | 62675.8 |
| rna polymerase sigma factor | LACAL_RS01920 | Not Available | Positive | 422234 - 422749 | 20281.8 |
| fecr family protein | LACAL_RS01925 | Not Available | Positive | 422819 - 423715 | 34230.6 |
| tonb-dependent receptor plug domain-containing protein | LACAL_RS01930 | Not Available | Positive | 423708 - 426020 | 87848.5 |
| mfs transporter | LACAL_RS01935 | Not Available | Positive | 426121 - 427422 | 47615.1 |
| dimethylarginine dimethylaminohydrolase family protein | LACAL_RS01940 | Not Available | Negative | 427468 - 428382 | 35017.8 |
| citrate synthase | LACAL_RS01945 | Not Available | Negative | 428448 - 429734 | 47737.4 |
| phosphopyruvate hydratase | LACAL_RS01950 | Not Available | Negative | 429913 - 431208 | 46626.2 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | LACAL_RS01955 | Not Available | Negative | 431362 - 432465 | 40374.7 |
| 50s ribosomal protein l17 | LACAL_RS01960 | Not Available | Negative | 432583 - 433050 | 17462.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
