Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase hera-like domain-containing protein | LACAL_RS01865 | Not Available | Positive | 411375 - 412913 | 56891.8 |
| hypothetical protein | LACAL_RS01870 | Not Available | Positive | 413010 - 413561 | 20538.8 |
| yitt family protein | LACAL_RS01875 | Not Available | Positive | 413721 - 414695 | 35138.3 |
| cupin domain-containing protein | LACAL_RS01880 | Not Available | Positive | 414711 - 415079 | 13822.4 |
| alpha/beta hydrolase | LACAL_RS01885 | Not Available | Positive | 415080 - 415907 | 31041.4 |
| 23s rrna pseudouridine(2604) synthase rluf | LACAL_RS01890 | Not Available | Positive | 415926 - 416711 | 30041.3 |
| voc family protein | LACAL_RS01895 | Not Available | Positive | 416735 - 417160 | 16221.2 |
| tigr02206 family membrane protein | LACAL_RS01900 | Not Available | Negative | 417153 - 417848 | 26890.9 |
| bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase | LACAL_RS01905 | Not Available | Negative | 417884 - 418765 | 32002.9 |
| signal recognition particle protein | LACAL_RS01910 | Not Available | Negative | 418899 - 420227 | 48322.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
