Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | LACAL_RS01815 | Not Available | Positive | 397798 - 398649 | 32337.9 |
| protein translocase subunit secdf | LACAL_RS01820 | Not Available | Negative | 398826 - 401843 | 109642.0 |
| hypothetical protein | LACAL_RS01825 | Not Available | Negative | 401993 - 402586 | 22122.6 |
| duf4412 domain-containing protein | LACAL_RS01830 | Not Available | Negative | 402730 - 403383 | 23979.9 |
| malate dehydrogenase | LACAL_RS01835 | Not Available | Negative | 403482 - 404408 | 32107.8 |
| duf6588 family protein | LACAL_RS01840 | Not Available | Negative | 404589 - 405602 | 36597.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | LACAL_RS01845 | Not Available | Negative | 405698 - 407647 | 72788.5 |
| asparagine synthase b | LACAL_RS01850 | Not Available | Negative | 407934 - 409607 | 63332.8 |
| 7-carboxy-7-deazaguanine synthase quee | LACAL_RS01855 | Not Available | Negative | 409831 - 410460 | 24027.9 |
| hypothetical protein | LACAL_RS01860 | Not Available | Positive | 410573 - 411271 | 25252.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
