Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | LACAL_RS01715 | Not Available | Positive | 372454 - 373278 | 30450.1 |
| diadenylate cyclase cdaa | LACAL_RS01720 | Not Available | Positive | 373326 - 374114 | 29342.3 |
| duf3667 domain-containing protein | LACAL_RS01725 | Not Available | Positive | 374204 - 374902 | 26976.6 |
| abc transporter atp-binding protein | LACAL_RS01730 | Not Available | Negative | 374899 - 376665 | 66585.7 |
| trna pseudouridine(38-40) synthase trua | LACAL_RS01735 | Not Available | Negative | 376675 - 377418 | 28277.3 |
| metallophosphoesterase family protein | LACAL_RS01740 | Not Available | Positive | 377526 - 378023 | 19143.4 |
| duf4293 domain-containing protein | LACAL_RS01745 | Not Available | Negative | 378085 - 378495 | 15310.4 |
| transcription termination factor rho | LACAL_RS01750 | Not Available | Positive | 378704 - 380389 | 63671.1 |
| 30s ribosomal protein s20 | LACAL_RS01755 | Not Available | Negative | 380711 - 380962 | 9459.73 |
| Trna-glu | Not Available | Not Available | Positive | 380989 - 381063 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
