Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LACAL_RS15510 | Not Available | Positive | 332121 - 332273 | 5885.47 |
| Trna-arg | Not Available | Not Available | Positive | 332409 - 332482 | Not Available |
| helix-turn-helix domain-containing protein | LACAL_RS14930 | Not Available | Negative | 332596 - 332871 | 10637.9 |
| heavy-metal-associated domain-containing protein | LACAL_RS01540 | Not Available | Negative | 333279 - 333773 | 17951.0 |
| efflux rnd transporter periplasmic adaptor subunit | LACAL_RS01545 | Not Available | Negative | 333806 - 335584 | 65645.1 |
| duf305 domain-containing protein | LACAL_RS01550 | Not Available | Negative | 335574 - 336056 | 18632.3 |
| cation transporter | LACAL_RS01555 | Not Available | Negative | 336083 - 336874 | 29115.3 |
| heavy metal translocating p-type atpase | LACAL_RS01560 | Not Available | Negative | 336879 - 339374 | 90581.9 |
| helix-turn-helix domain-containing protein | LACAL_RS01565 | Not Available | Negative | 339450 - 340007 | 21363.8 |
| nuclear transport factor 2 family protein | LACAL_RS15515 | Not Available | Negative | 340011 - 340274 | 9881.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
