Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | LACAL_RS00110 | Not Available | Positive | 18073 - 20292 | 81590.5 |
| hypothetical protein | LACAL_RS00115 | Not Available | Negative | 20621 - 21127 | 18931.2 |
| hypothetical protein | LACAL_RS00120 | Not Available | Negative | 21133 - 22446 | 50688.6 |
| tetratricopeptide repeat protein | LACAL_RS00125 | Not Available | Negative | 22454 - 23323 | 34383.5 |
| duf6140 family protein | LACAL_RS00130 | Not Available | Negative | 23334 - 23543 | 7665.22 |
| helix-turn-helix transcriptional regulator | LACAL_RS00135 | Not Available | Negative | 23654 - 24643 | 38824.1 |
| polysaccharide biosynthesis c-terminal domain-containing protein | LACAL_RS00140 | Not Available | Positive | 24720 - 25976 | 48703.7 |
| tonb-dependent receptor | LACAL_RS00145 | Not Available | Positive | 26195 - 28570 | 89500.5 |
| duf4249 domain-containing protein | LACAL_RS00150 | Not Available | Positive | 28575 - 29390 | 30834.2 |
| n-acetylmuramic acid 6-phosphate etherase | LACAL_RS00155 | Not Available | Positive | 29546 - 30358 | 29660.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
