Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | LACAL_RS14625 | Not Available | Negative | 3241807 - 3243081 | 46435.6 |
| fumarylacetoacetase | LACAL_RS14630 | Not Available | Positive | 3243304 - 3244590 | 48190.4 |
| hypothetical protein | LACAL_RS14635 | Not Available | Positive | 3244710 - 3245891 | 46121.3 |
| bacillithiol system redox-active protein ytxj | LACAL_RS14640 | Not Available | Negative | 3245949 - 3246335 | 14646.8 |
| response regulator | LACAL_RS14645 | Not Available | Negative | 3246409 - 3246825 | 15710.3 |
| pas domain-containing sensor histidine kinase | LACAL_RS15135 | Not Available | Negative | 3246828 - 3249758 | 111874.0 |
| atp-dependent chaperone clpb | LACAL_RS14655 | Not Available | Positive | 3250012 - 3252618 | 97625.2 |
| hypothetical protein | LACAL_RS14660 | Not Available | Positive | 3252822 - 3253226 | 15697.9 |
| hypothetical protein | LACAL_RS14665 | Not Available | Positive | 3253213 - 3253605 | 15145.3 |
| malate dehydrogenase (quinone) | LACAL_RS14670 | Not Available | Negative | 3253620 - 3255107 | 55553.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
