Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase family protein | LACAL_RS01420 | Not Available | Negative | 305550 - 308963 | 127254.0 |
| formyltetrahydrofolate deformylase | LACAL_RS01425 | Not Available | Positive | 309111 - 309959 | 32361.1 |
| duf4197 domain-containing protein | LACAL_RS01430 | Not Available | Positive | 310077 - 310781 | 25774.9 |
| lacal_2735 family protein | LACAL_RS01435 | Not Available | Positive | 311034 - 311231 | 7660.24 |
| abc transporter substrate-binding protein | LACAL_RS01440 | Not Available | Negative | 311214 - 312005 | 30532.9 |
| orotidine-5'-phosphate decarboxylase | LACAL_RS01445 | Not Available | Negative | 312033 - 312848 | 30321.5 |
| peptide chain release factor 1 | LACAL_RS01450 | Not Available | Negative | 312894 - 313970 | 40638.1 |
| duf3078 domain-containing protein | LACAL_RS01460 | Not Available | Negative | 314373 - 315326 | 36264.8 |
| air synthase related protein | LACAL_RS01465 | Not Available | Negative | 315344 - 316522 | 43099.3 |
| carboxypeptidase regulatory-like domain-containing protein | LACAL_RS01470 | Not Available | Negative | 316610 - 318133 | 55705.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
