Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LACAL_RS15235 | Not Available | Positive | 3134662 - 3134910 | 9760.86 |
| hypothetical protein | LACAL_RS14115 | Not Available | Positive | 3134997 - 3135707 | 27673.5 |
| hypothetical protein | LACAL_RS15240 | Not Available | Positive | 3136005 - 3136253 | 9760.86 |
| stm3941 family protein | LACAL_RS14120 | Not Available | Positive | 3136350 - 3136877 | 19385.0 |
| transposase | LACAL_RS14125 | Not Available | Positive | 3137064 - 3137429 | 14304.7 |
| is3 family transposase | LACAL_RS14130 | Not Available | Positive | 3137435 - 3138286 | 33148.3 |
| alpha/beta hydrolase family protein | LACAL_RS14135 | Not Available | Positive | 3138337 - 3139311 | 36805.2 |
| transposase | LACAL_RS15245 | Not Available | Negative | 3139354 - 3139608 | 9096.22 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | LACAL_RS14140 | Not Available | Negative | 3139601 - 3140995 | 50883.3 |
| rhomboid family intramembrane serine protease | LACAL_RS14145 | Not Available | Negative | 3140999 - 3141646 | 23925.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
