Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1684 domain-containing protein | LACAL_RS01370 | Not Available | Negative | 297410 - 298012 | 23070.4 |
| mfs transporter | LACAL_RS01375 | Not Available | Positive | 298284 - 299522 | 45932.8 |
| voc family protein | LACAL_RS01380 | Not Available | Positive | 299491 - 299865 | 14323.2 |
| coce/nond family hydrolase | LACAL_RS01385 | Not Available | Negative | 299862 - 301799 | 74035.1 |
| dj-1/pfpi family protein | LACAL_RS01390 | Not Available | Positive | 301852 - 302625 | 29077.3 |
| res family nad+ phosphorylase | LACAL_RS01395 | Not Available | Negative | 302622 - 303092 | 17729.7 |
| antitoxin xre-like helix-turn-helix domain-containing protein | LACAL_RS01400 | Not Available | Negative | 303095 - 303598 | 18689.4 |
| sigma-70 family rna polymerase sigma factor | LACAL_RS01405 | Not Available | Negative | 303664 - 304209 | 20919.4 |
| lrp/asnc family transcriptional regulator | LACAL_RS01410 | Not Available | Negative | 304438 - 304878 | 16628.5 |
| hypothetical protein | LACAL_RS01415 | Not Available | Positive | 304997 - 305392 | 15469.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
