Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii 3-dehydroquinate dehydratase | LACAL_RS13470 | Not Available | Negative | 3001553 - 3001969 | 15343.3 |
| outer membrane beta-barrel protein | LACAL_RS13475 | Not Available | Negative | 3002047 - 3002676 | 22305.9 |
| porin family protein | LACAL_RS13480 | Not Available | Negative | 3002919 - 3003608 | 25483.5 |
| site-specific tyrosine recombinase/integron integrase | LACAL_RS13485 | Not Available | Positive | 3003774 - 3004670 | 34412.6 |
| pas domain-containing sensor histidine kinase | LACAL_RS13490 | Not Available | Positive | 3004815 - 3005933 | 42543.3 |
| ribonuclease y | LACAL_RS13495 | Not Available | Negative | 3005972 - 3007543 | 58137.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 3007614 - 3007752 | Not Available |
| cell division protein zapa | LACAL_RS13500 | Not Available | Negative | 3007811 - 3008104 | 11023.3 |
| hypothetical protein | LACAL_RS13505 | Not Available | Negative | 3008120 - 3008410 | 11014.1 |
| m23 family metallopeptidase | LACAL_RS13510 | Not Available | Positive | 3008669 - 3010354 | 64825.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
