Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | LACAL_RS15580 | Not Available | Negative | 2978240 - 2978710 | 17137.9 |
| lysm peptidoglycan-binding domain-containing protein | LACAL_RS13375 | Not Available | Negative | 2978730 - 2979845 | 41312.6 |
| endopeptidase la | LACAL_RS13380 | Not Available | Negative | 2979847 - 2982294 | 91420.9 |
| rna polymerase sigma factor | LACAL_RS13385 | Not Available | Positive | 2982572 - 2983129 | 21577.1 |
| hypothetical protein | LACAL_RS13390 | Not Available | Positive | 2983168 - 2983725 | 21190.5 |
| hypothetical protein | LACAL_RS13395 | Not Available | Positive | 2983703 - 2984794 | 41316.6 |
| head gin domain-containing protein | LACAL_RS13400 | Not Available | Positive | 2984877 - 2985608 | 25888.7 |
| hypothetical protein | LACAL_RS13405 | Not Available | Negative | 2985679 - 2986833 | 40668.2 |
| mfs transporter | LACAL_RS13410 | Not Available | Negative | 2986870 - 2988171 | 48864.6 |
| m48 family metallopeptidase | LACAL_RS13415 | Not Available | Negative | 2988235 - 2989065 | 29995.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
