Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnaj | LACAL_RS01315 | Not Available | Negative | 289324 - 290442 | 40253.8 |
| nucleotide exchange factor grpe | LACAL_RS01320 | Not Available | Negative | 290494 - 291033 | 20575.7 |
| ycei family protein | LACAL_RS01325 | Not Available | Positive | 291190 - 291825 | 22978.4 |
| tigr01777 family oxidoreductase | LACAL_RS01330 | Not Available | Negative | 291889 - 292791 | 33088.2 |
| trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd | LACAL_RS01335 | Not Available | Negative | 292870 - 293538 | 25312.6 |
| duf4920 domain-containing protein | LACAL_RS01340 | Not Available | Negative | 293540 - 294046 | 18720.4 |
| branched-chain amino acid aminotransferase | LACAL_RS01345 | Not Available | Positive | 294153 - 295217 | 39781.3 |
| nucleoside triphosphate pyrophosphohydrolase family protein | LACAL_RS01350 | Not Available | Negative | 295266 - 295652 | 14510.4 |
| srpbcc family protein | LACAL_RS01360 | Not Available | Positive | 295996 - 297018 | 38274.7 |
| fluoride efflux transporter crcb | LACAL_RS01365 | Not Available | Positive | 297042 - 297413 | 13218.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
