Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 1 | LACAL_RS13270 | Not Available | Negative | 2948566 - 2950629 | 79578.9 |
| sixa phosphatase family protein | LACAL_RS13275 | Not Available | Negative | 2950668 - 2951177 | 19217.1 |
| hypothetical protein | LACAL_RS13280 | Not Available | Positive | 2951588 - 2955355 | 135328.0 |
| hypothetical protein | LACAL_RS13285 | Not Available | Positive | 2955312 - 2958947 | 127341.0 |
| hypothetical protein | LACAL_RS13290 | Not Available | Positive | 2958931 - 2960127 | 41904.6 |
| gliding motility-associated c-terminal domain-containing protein | LACAL_RS13295 | Not Available | Positive | 2960084 - 2964724 | 164132.0 |
| type ix secretion system membrane protein porp/sprf | LACAL_RS13300 | Not Available | Positive | 2964733 - 2965677 | 35701.5 |
| ompa family protein | LACAL_RS13305 | Not Available | Positive | 2965678 - 2967618 | 74463.2 |
| cap domain-containing protein | LACAL_RS13310 | Not Available | Negative | 2967826 - 2968317 | 18332.3 |
| pyridoxamine 5'-phosphate oxidase | LACAL_RS13315 | Not Available | Negative | 2968501 - 2969148 | 24908.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
