Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | LACAL_RS13225 | Not Available | Negative | 2939756 - 2941192 | 54834.9 |
| hypothetical protein | LACAL_RS13230 | Not Available | Positive | 2941312 - 2942052 | 28189.4 |
| duf3822 family protein | LACAL_RS13235 | Not Available | Positive | 2942036 - 2942857 | 31536.5 |
| rsmd family rna methyltransferase | LACAL_RS13240 | Not Available | Positive | 2942857 - 2943408 | 20920.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 2943453 - 2943777 | Not Available |
| transposase | LACAL_RS13245 | Not Available | Positive | 2943999 - 2945728 | 64349.0 |
| hypothetical protein | LACAL_RS13250 | Not Available | Positive | 2945783 - 2946343 | 21924.1 |
| pp_02634 | LACAL_RS13255 | Not Available | Positive | 2946355 - 2946936 | Not Available |
| porin family protein | LACAL_RS13260 | Not Available | Negative | 2947023 - 2947553 | 19624.3 |
| ppx/gppa phosphatase family protein | LACAL_RS13265 | Not Available | Negative | 2947661 - 2948572 | 34009.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
