Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4159 domain-containing protein | LACAL_RS12980 | Not Available | Positive | 2883450 - 2884118 | 25312.2 |
| trmh family rna methyltransferase | LACAL_RS12985 | Not Available | Positive | 2884316 - 2884816 | 18721.7 |
| ai-2e family transporter | LACAL_RS12990 | Not Available | Positive | 2884886 - 2885977 | 40464.3 |
| thump-like domain-containing protein | LACAL_RS12995 | Not Available | Positive | 2885988 - 2887169 | 45249.8 |
| ligase-associated dna damage response endonuclease pdem | LACAL_RS13000 | Not Available | Negative | 2887166 - 2887816 | 24615.1 |
| ligase-associated dna damage response dexh box helicase | LACAL_RS13005 | Not Available | Negative | 2887818 - 2890271 | 92545.0 |
| atp-dependent dna ligase | LACAL_RS13010 | Not Available | Negative | 2890273 - 2891862 | 61074.8 |
| ligase-associated dna damage response exonuclease | LACAL_RS13015 | Not Available | Negative | 2891862 - 2892890 | 38287.0 |
| hypothetical protein | LACAL_RS15480 | Not Available | Negative | 2892999 - 2893160 | 6212.65 |
| Trna-arg | Not Available | Not Available | Positive | 2893239 - 2893312 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
